BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007C08LP1|AL425667
(749 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1714 1485 0.0
>3x_Contig1714
Length = 18873
Score = 1485 bits (749), Expect = 0.0
Identities = 749/749 (100%)
Strand = Plus / Plus
Query: 1 gatcttctgaagacgatagtgttattgaatcttcagatggacagtcagagtctatatctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 gatcttctgaagacgatagtgttattgaatcttcagatggacagtcagagtctatatctg 922
Query: 61 ctcccaattttgaccatcactcatctgagccaacactacagagtggtggtacagtatctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 ctcccaattttgaccatcactcatctgagccaacactacagagtggtggtacagtatctg 982
Query: 121 caccttcttctttagagagtaatgaaatcgaagaagaagatgaggaactaagcgatttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 caccttcttctttagagagtaatgaaatcgaagaagaagatgaggaactaagcgatttac 1042
Query: 181 ccactggtgtttcttattatgggctgcattcaggaggcgatcctcgaaataggttaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 ccactggtgtttcttattatgggctgcattcaggaggcgatcctcgaaataggttaaaca 1102
Query: 241 gggtcatgagtacaaattatttatcatatgagcctaaaattggaagaaactcaacttttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1103 gggtcatgagtacaaattatttatcatatgagcctaaaattggaagaaactcaacttttg 1162
Query: 301 ttggattatcagaatcgcaaaaagttgaattaggaggggttgaatataggtccaccaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163 ttggattatcagaatcgcaaaaagttgaattaggaggggttgaatataggtccaccaagg 1222
Query: 361 ttttatgtctacttttgtcgatatattatctcggttttagtattttagctatgatcatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1223 ttttatgtctacttttgtcgatatattatctcggttttagtattttagctatgatcatat 1282
Query: 421 tcgctgcgtggatacaacctatgaacaattataaagaaattgttagatctcaaggtgttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1283 tcgctgcgtggatacaacctatgaacaattataaagaaattgttagatctcaaggtgttt 1342
Query: 481 cgccaacatggtgggggttttggactggaatgagtgcatttggtaatcttggattaacat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1343 cgccaacatggtgggggttttggactggaatgagtgcatttggtaatcttggattaacat 1402
Query: 541 tgactccgaactccatgatatcatttcacaagtcaatatacacgttaatttggatgatgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1403 tgactccgaactccatgatatcatttcacaagtcaatatacacgttaatttggatgatgt 1462
Query: 601 ggttcattgttattggtaacactggatttccaatttttctccgtttcgttatttggatac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1463 ggttcattgttattggtaacactggatttccaatttttctccgtttcgttatttggatac 1522
Query: 661 ttttcaaactaagtccagatctgtccttgagaaaagatagtctagggtttttattagacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1523 ttttcaaactaagtccagatctgtccttgagaaaagatagtctagggtttttattagacc 1582
Query: 721 atcctcgtagatgtttcacaatgctattt 749
|||||||||||||||||||||||||||||
Sbjct: 1583 atcctcgtagatgtttcacaatgctattt 1611
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6600
Number of Sequences: 1807
Number of extensions: 6600
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 749
length of database: 10,358,551
effective HSP length: 16
effective length of query: 733
effective length of database: 10,329,639
effective search space: 7571625387
effective search space used: 7571625387
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)